If it is, I'd have no idea why. I used the save games posted to Holowan Labs to determine what global variables to set. (This is the only thing I can imagine that would possibly cause a conflict.) The only other possibility is if that cut scene also included a file called either intro.dlg or Varwarp.ncc as those are basically the only files this mod introduces to the game. I guess I'll pop over and take a look at it. I actually haven't played with it too much since I made this mod, but.... hmmmm. I'm gonna guess that scene is in one of the ebon hawk modules. Let me go look.
Modding is a lot like this:
But hurts your brain more and is strangely fun at the same time...