There may be compatibility issues between Allronix' dialogue pack 2.1 and Master Kavar's mod as they both use same global variables and may cause a mess with a female PC. I can't find the source of this problem though. Neither the gender or the romance tracking global should have anything to do with stopping the fight triggering the dialog. That Wotor 1.03's k_psta_pcwalk.ncs will give bastila her unique saber (I think) and shouldn't interfere with the dialog either.
What other mods do you have installed?