What mostly that was optimized is my own code. I got rid of unnecessary calls to functions and redundant use of code. This was a pretty lengthy process, but I can see a difference now than what this mod was in its alpha stage. Thanks for the great comment. I look forward to creating new versions to please those of the Jedi Knight II community.
Also, Me and a couple of buddies of mine are creating a script that works with the mod as well has some neat tools that you may find useful when playing jk2. The Jedi Academy Script will be out in a week or so.